Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RR48_00376 | RR48_03415 | A0A0N0PFT1 | A0A0N1I7M1 | Uncharacterized protein. | Ras-related protein Rab-6A. | 0.585 |
RR48_00376 | RR48_03567 | A0A0N0PFT1 | A0A0N1IGD9 | Uncharacterized protein. | Ras-related protein Rab-18. | 0.576 |
RR48_00376 | RR48_06439 | A0A0N0PFT1 | A0A194R3H1 | Uncharacterized protein. | Rab3 GTPase-activating protein regulatory subunit. | 0.593 |
RR48_00376 | RR48_06721 | A0A0N0PFT1 | A0A194R5X6 | Uncharacterized protein. | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.784 |
RR48_00376 | RR48_10524 | A0A0N0PFT1 | A0A194R5V5 | Uncharacterized protein. | Dynactin subunit 5. | 0.976 |
RR48_00376 | RR48_11506 | A0A0N0PFT1 | A0A194R4T2 | Uncharacterized protein. | Rab3 GTPase-activating protein catalytic subunit. | 0.537 |
RR48_00376 | RR48_11508 | A0A0N0PFT1 | A0A194R3I1 | Uncharacterized protein. | Rab3 GTPase-activating protein catalytic subunit. | 0.537 |
RR48_02471 | RR48_03415 | A0A0N1IAF4 | A0A0N1I7M1 | Dynactin subunit 4. | Ras-related protein Rab-6A. | 0.585 |
RR48_02471 | RR48_03567 | A0A0N1IAF4 | A0A0N1IGD9 | Dynactin subunit 4. | Ras-related protein Rab-18. | 0.576 |
RR48_02471 | RR48_06439 | A0A0N1IAF4 | A0A194R3H1 | Dynactin subunit 4. | Rab3 GTPase-activating protein regulatory subunit. | 0.593 |
RR48_02471 | RR48_06721 | A0A0N1IAF4 | A0A194R5X6 | Dynactin subunit 4. | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.820 |
RR48_02471 | RR48_10524 | A0A0N1IAF4 | A0A194R5V5 | Dynactin subunit 4. | Dynactin subunit 5. | 0.976 |
RR48_02471 | RR48_11506 | A0A0N1IAF4 | A0A194R4T2 | Dynactin subunit 4. | Rab3 GTPase-activating protein catalytic subunit. | 0.537 |
RR48_02471 | RR48_11508 | A0A0N1IAF4 | A0A194R3I1 | Dynactin subunit 4. | Rab3 GTPase-activating protein catalytic subunit. | 0.537 |
RR48_03415 | RR48_00376 | A0A0N1I7M1 | A0A0N0PFT1 | Ras-related protein Rab-6A. | Uncharacterized protein. | 0.585 |
RR48_03415 | RR48_02471 | A0A0N1I7M1 | A0A0N1IAF4 | Ras-related protein Rab-6A. | Dynactin subunit 4. | 0.585 |
RR48_03415 | RR48_03567 | A0A0N1I7M1 | A0A0N1IGD9 | Ras-related protein Rab-6A. | Ras-related protein Rab-18. | 0.767 |
RR48_03415 | RR48_06439 | A0A0N1I7M1 | A0A194R3H1 | Ras-related protein Rab-6A. | Rab3 GTPase-activating protein regulatory subunit. | 0.714 |
RR48_03415 | RR48_06721 | A0A0N1I7M1 | A0A194R5X6 | Ras-related protein Rab-6A. | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.697 |
RR48_03415 | RR48_09327 | A0A0N1I7M1 | A0A194RDE3 | Ras-related protein Rab-6A. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.811 |
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