Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RR48_00006 | RR48_03380 | A0A0N0PFC8 | A0A0N1I6I1 | VPS9 domain-containing protein. | Rab5 GDP/GTP exchange factor. | 0.603 |
RR48_00006 | RR48_05426 | A0A0N0PFC8 | A0A0N1IGZ5 | VPS9 domain-containing protein. | Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family. | 0.558 |
RR48_00006 | RR48_06755 | A0A0N0PFC8 | A0A194R6G7 | VPS9 domain-containing protein. | Ras-related protein Rab-5B. | 0.992 |
RR48_00006 | RR48_09339 | A0A0N0PFC8 | A0A194RCI4 | VPS9 domain-containing protein. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.917 |
RR48_00006 | RR48_09381 | A0A0N0PFC8 | A0A194RCV4 | VPS9 domain-containing protein. | Rab GTPase-binding effector protein 1. | 0.997 |
RR48_00006 | RR48_09382 | A0A0N0PFC8 | A0A194RC85 | VPS9 domain-containing protein. | Rab GTPase-binding effector protein 1. | 0.997 |
RR48_00006 | RR48_12575 | A0A0N0PFC8 | A0A194RNT0 | VPS9 domain-containing protein. | Rabenosyn-5. | 0.684 |
RR48_00006 | RR48_14888 | A0A0N0PFC8 | A0A194R160 | VPS9 domain-containing protein. | Cyclin-G-associated kinase. | 0.485 |
RR48_03380 | RR48_00006 | A0A0N1I6I1 | A0A0N0PFC8 | Rab5 GDP/GTP exchange factor. | VPS9 domain-containing protein. | 0.603 |
RR48_03380 | RR48_05426 | A0A0N1I6I1 | A0A0N1IGZ5 | Rab5 GDP/GTP exchange factor. | Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family. | 0.558 |
RR48_03380 | RR48_06755 | A0A0N1I6I1 | A0A194R6G7 | Rab5 GDP/GTP exchange factor. | Ras-related protein Rab-5B. | 0.993 |
RR48_03380 | RR48_09339 | A0A0N1I6I1 | A0A194RCI4 | Rab5 GDP/GTP exchange factor. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.917 |
RR48_03380 | RR48_09381 | A0A0N1I6I1 | A0A194RCV4 | Rab5 GDP/GTP exchange factor. | Rab GTPase-binding effector protein 1. | 0.997 |
RR48_03380 | RR48_09382 | A0A0N1I6I1 | A0A194RC85 | Rab5 GDP/GTP exchange factor. | Rab GTPase-binding effector protein 1. | 0.997 |
RR48_03380 | RR48_12575 | A0A0N1I6I1 | A0A194RNT0 | Rab5 GDP/GTP exchange factor. | Rabenosyn-5. | 0.684 |
RR48_03380 | RR48_14888 | A0A0N1I6I1 | A0A194R160 | Rab5 GDP/GTP exchange factor. | Cyclin-G-associated kinase. | 0.485 |
RR48_04237 | RR48_05426 | A0A0N0PBM0 | A0A0N1IGZ5 | Phosphatidylinositol 3-kinase catalytic subunit type 3. | Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family. | 0.526 |
RR48_04237 | RR48_06755 | A0A0N0PBM0 | A0A194R6G7 | Phosphatidylinositol 3-kinase catalytic subunit type 3. | Ras-related protein Rab-5B. | 0.942 |
RR48_04237 | RR48_12575 | A0A0N0PBM0 | A0A194RNT0 | Phosphatidylinositol 3-kinase catalytic subunit type 3. | Rabenosyn-5. | 0.670 |
RR48_04237 | RR48_14888 | A0A0N0PBM0 | A0A194R160 | Phosphatidylinositol 3-kinase catalytic subunit type 3. | Cyclin-G-associated kinase. | 0.434 |
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