STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LKI_03795ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component. (250 aa)    
Predicted Functional Partners:
LKI_03800
ABC transporter permease and substrate binding protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
 
 0.988
LKI_03160
Enterococcus faecalis plasmid pPD1 bacI; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
 0.983
LKI_03810
Sensor protein kinase; COG0642 Signal transduction histidine kinase.
 
   
 0.952
LKI_03805
Hypothetical protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
   
 0.921
LKI_05585
ABC transporter ATP-binding and permease protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
 
0.703
LKI_00830
Putative ABC transporter permease protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
 
 0.674
LKI_03150
COG0845 Membrane-fusion protein.
 
 
 0.655
LKI_03820
Putative ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
   
0.534
LKI_02170
Putative ABC transporter; COG1132 ABC-type multidrug transport system, ATPase and permease components.
     
0.519
LKI_03785
ABC transporter substrate binding protein; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin.
  
  
 0.513
Your Current Organism:
Leuconostoc kimchii
NCBI taxonomy Id: 762051
Other names: L. kimchii IMSNU 11154, Leuconostoc kimchii IMSNU 11154, Leuconostoc kimchii str. IMSNU 11154, Leuconostoc kimchii strain IMSNU 11154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.