STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSTEL_0340Type I restriction endonuclease subunit M. (508 aa)    
Predicted Functional Partners:
BSTEL_0341
Type I restriction-modification system, S subunit.
 
 0.980
BSTEL_0339
Type I site-specific deoxyribonuclease.
 
   0.967
BSTEL_1270
Type I restriction-modification system specificity subunit.
 
 
 0.894
BSTEL_0342
Type I restriction enzyme specificity protein.
 
     0.887
BSTEL_1261
Type III restriction protein res subunit.
 
   0.849
BSTEL_0338
Hypothetical protein.
       0.773
BSTEL_2018
Type I restriction-modification system, S subunit.
 
 
 0.701
BSTEL_0295
Type I restriction modification DNA specificity domain protein.
  
   0.692
BSTEL_0293
Putative type I restriction enzyme.
 
   0.689
BSTEL_0809
Restriction modification system DNA specificity domain-containing protein.
  
 
 0.651
Your Current Organism:
Bifidobacterium stellenboschense
NCBI taxonomy Id: 762211
Other names: B. stellenboschense, Bifidobacterium sp. AFB23-3, Bifidobacterium stellenboschense Endo et al. 2012, DSM 23968, JCM 17298, strain AFB23-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.