STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSTEL_1411Transcriptional regulator. (289 aa)    
Predicted Functional Partners:
BSTEL_1642
PTS system N-acetylglucosamine-specific transporter subunit IIBC.
 
 
 0.825
BSTEL_1641
PTS system glucose subfamily transporter subunit IIA.
 
 
 0.824
BSTEL_0755
PTS mannose transporter subunit IIABC.
  
 
 0.792
BSTEL_0929
Transketolase; Belongs to the transketolase family.
     
 0.463
BSTEL_1713
Fused ATP-binding protein and permease of ABC transporter.
  
    0.437
BSTEL_0847
GntR family transcriptional regulator.
  
     0.430
BSTEL_1410
Hypothetical protein.
       0.427
Your Current Organism:
Bifidobacterium stellenboschense
NCBI taxonomy Id: 762211
Other names: B. stellenboschense, Bifidobacterium sp. AFB23-3, Bifidobacterium stellenboschense Endo et al. 2012, DSM 23968, JCM 17298, strain AFB23-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.