Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BSTEL_2002ABC transporter ATP-binding protein. (265 aa)    
Predicted Functional Partners:
BSTEL_2001
Saly-type abc antimicrobial peptide transport system permease component.
 
   0.941
BSTEL_2000
ABC transporter permease.
 
   0.922
BSTEL_0250
ABC transporter permease.
  
 0.898
BSTEL_1999
Putative membrane protein.
 
    0.862
BSTEL_1241
Efflux ABC transporter permease.
 
 0.853
BSTEL_0079
Efflux ABC transporter permease.
  
  0.805
BSTEL_1998
Amino acid ABC transporter substrate-binding protein.
 
     0.796
BSTEL_1997
Iron permease FTR1.
 
     0.793
BSTEL_1307
Peptide ABC transporter permease.
  0.783
BSTEL_0582
Permease protein of ABC transporter system.
 
  0.609
Your Current Organism:
Bifidobacterium stellenboschense
NCBI taxonomy Id: 762211
Other names: B. stellenboschense, Bifidobacterium sp. AFB23-3, Bifidobacterium stellenboschense Endo et al. 2012, DSM 23968, JCM 17298, strain AFB23-3
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