Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13425.1Nitrate transport ATP-binding protein NrtC domain protein 1. (256 aa)    
Predicted Functional Partners:
ADP13424.1
Binding-protein-dependent transport system inner membrane component family protein 1.
 
 0.990
ADP17230.1
Binding-protein-dependent transport system inner membrane component family protein 47.
 
 0.969
ADP17231.1
Binding-protein-dependent transport system inner membrane component family protein 48.
 
 0.968
ADP13668.1
Binding-protein-dependent transport system inner membrane component family protein 5.
 
 0.956
ADP18303.1
Binding-protein-dependent transport system inner membrane component family protein 56.
 
 0.956
ADP15638.1
Binding-protein-dependent transport system inner membrane component family protein 29.
 
 0.955
ADP19816.1
Binding-protein-dependent transport system inner membrane component family protein 69.
 
 0.953
ssuE
FMN reductase.
  
 
 0.937
ADP13426.1
NMT1/THI5 like family protein 1.
 
 
 0.914
ADP16744.1
Binding-protein-dependent transport system inner membrane component family protein 39.
 
 
 0.868
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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