STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13431.1TRAP transporter, 4TM/12TM fusion family protein 1. (674 aa)    
Predicted Functional Partners:
ADP13432.1
TRAP transporter solute receptor, TAXI family protein 1.
 
  
 0.932
ADP15464.1
TRAP transporter solute receptor, TAXI family protein 3.
 
  
 0.861
ADP14065.1
TRAP transporter solute receptor, TAXI family protein 2.
 
  
 0.855
ADP17629.1
Tripartite ATP-independent periplasmic transporter, DctQ component family protein 10.
  
   
 0.456
smg
Hypothetical protein; Belongs to the Smg family.
       0.436
ADP15315.1
Tripartite ATP-independent periplasmic transporter, DctQ component family protein 1.
  
   
 0.404
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.