Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13436.1CsbD-like family protein 1; Belongs to the UPF0337 (CsbD) family. (61 aa)    
Predicted Functional Partners:
ADP15013.1
Hypothetical protein.
  
  
 0.789
ADP13437.1
Sensory box protein 1.
 
     0.767
ADP15236.1
Hypothetical protein.
   
    0.752
ADP13435.1
Entericidin EcnA/B family protein 1.
     
 0.629
ADP18473.1
Sensory box protein 10.
 
     0.595
ADP16583.1
Hypothetical protein.
  
  
 0.589
ADP17892.1
Hypothetical protein.
   
    0.578
ADP15012.1
Phospholipid-binding domain protein 1.
  
  
 0.552
ADP19447.1
Phospholipid-binding domain protein 3.
  
  
 0.552
ADP15513.1
Twin-arginine translocation pathway signal 1.
  
    0.542
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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