STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13444.1Restriction endonuclease family protein 1. (292 aa)    
Predicted Functional Partners:
ADP16291.1
Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain protein.
   
    0.772
ADP18976.1
CitB domain protein.
  
    0.737
ADP19644.1
N-6 adenine-specific DNA methylase 3.
 
  
 0.713
ADP19642.1
Type III restriction enzyme, Res subunit.
 
  
 0.687
fdxH
Formate dehydrogenase, beta subunit.
   
    0.679
ADP15759.1
Sulfur reductase FeS subunit.
   
    0.679
ADP19643.1
Type I restriction enzyme StySPI specificity protein.
 
  
 0.499
ADP13445.1
Hypothetical protein.
       0.496
prpF
AcnD-accessory protein PrpF.
   
  
 0.475
ADP13443.1
Filamentation induced by cAMP protein Fic 1.
  
    0.450
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.