STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13462.1TonB-dependent siderophore receptor family protein 1. (808 aa)    
Predicted Functional Partners:
ADP13463.1
FecR family protein 1.
 
 
 0.788
ADP13464.1
RNA polymerase sigma factor, sigma-70 family protein 1; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.631
ADP16462.1
Tat pathway signal sequence domain protein 16.
 
 
 0.588
ADP18073.1
PepSY-associated TM helix family protein 8.
 
  
 0.585
ADP16267.1
PepSY-associated TM helix family protein 5.
 
  
 0.576
ADP13866.1
TonB-dependent Receptor Plug domain protein 1.
  
  
 0.564
ADP18801.1
PepSY-associated TM helix family protein 10.
 
  
 0.555
ADP16239.1
PepSY-associated TM helix family protein 4.
 
  
 0.545
ADP14992.1
PepSY-associated TM helix family protein 2.
 
  
 0.538
ADP18556.1
FecR family protein 21.
 
 
 0.538
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.