Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADP13487.1Extracellular ligand-binding receptor family protein. (403 aa)    
Predicted Functional Partners:
ADP15226.1
Inner-membrane translocator 24; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.887
ADP14847.1
Inner-membrane translocator 22; Belongs to the binding-protein-dependent transport system permease family.
 
    0.845
ADP14075.1
Inner-membrane translocator 14; Belongs to the binding-protein-dependent transport system permease family.
 
    0.844
ADP14076.1
Inner-membrane translocator 15; Belongs to the binding-protein-dependent transport system permease family.
 
    0.836
ADP14848.1
Inner-membrane translocator 23; Belongs to the binding-protein-dependent transport system permease family.
 
    0.836
ADP14079.1
ABC transporter family protein 16.
 
    0.829
ADP14851.1
ABC transporter family protein 27.
 
    0.829
ADP15224.1
ABC transporter family protein 29.
 
    0.829
ADP14078.1
ABC transporter family protein 15.
 
    0.817
ADP14850.1
ABC transporter family protein 26.
 
    0.817
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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