Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13511.1Hypothetical protein. (490 aa)    
Predicted Functional Partners:
ADP19627.1
Hypothetical protein.
  
    0.784
ADP17923.1
Putative lipoprotein 14.
  
    0.773
ADP15263.1
Putative lipoprotein 5.
  
     0.759
ADP18640.1
Hypothetical protein.
  
     0.732
ADP19321.1
Major MR/P fimbria protein.
  
   
 0.706
ADP15351.1
Hypothetical protein.
  
     0.705
ADP17847.1
Hypothetical protein.
  
    0.703
ADP13892.1
PsiF repeat family protein.
  
     0.646
ADP15655.1
Tetratricopeptide repeat family protein 6.
  
     0.641
ADP15437.1
Hypothetical protein.
  
     0.640
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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