Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13518.1Putative membrane protein 1. (495 aa)    
Predicted Functional Partners:
ADP13517.1
GTPase family protein 1.
 
     0.964
ADP16179.1
Hypothetical protein.
  
     0.751
ADP13519.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 2.
     
 0.661
ADP14993.1
Putative membrane protein 17.
  
     0.605
ADP15325.1
methylpurine-DNA glycosylase family protein; Belongs to the DNA glycosylase MPG family.
  
     0.588
ADP18884.1
CAAX amino terminal protease family protein 2.
  
     0.585
ADP18945.1
Hypothetical protein.
  
    0.582
ADP14587.1
Hypothetical protein.
  
     0.541
ADP16851.1
Peptidase inhibitor I78 family protein.
  
     0.534
ADP13511.1
Hypothetical protein.
  
     0.521
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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