STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13521.1Aminotransferase class-V family protein 1. (398 aa)    
Predicted Functional Partners:
iscU
FeS cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
  
 
 0.926
ADP18592.1
NifQ family protein.
  
 
 0.918
ADP13522.1
Endoribonuclease L-PSP family protein 2.
  
    0.758
cydC1
ABC transporter, CydDC cysteine exporter family, permease/ATP-binding protein CydC 1.
 
    0.672
ADP13523.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 7; Belongs to the LysR transcriptional regulatory family.
       0.519
ADP16552.1
Endonuclease/exonuclease/phosphatase family protein 1.
   
   0.517
ADP19609.1
Endonuclease/exonuclease/phosphatase family protein 2.
   
   0.517
iscA
Iron-sulfur cluster assembly protein IscA; Belongs to the HesB/IscA family.
  
 
 0.515
ADP13567.1
Ferredoxin-dependent glutamate synthase.
  
  
 0.490
ADP15275.1
Methyltransferase type 12.
  
  
 0.455
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.