STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13537.1Peptidase S1 and S6, chymotrypsin/Hap. (386 aa)    
Predicted Functional Partners:
ADP14890.1
Anti sigma-E protein RseA, N-terminal domain protein.
  
 
 0.808
ADP13536.1
NGG1p interacting factor 3 family protein.
 
    0.705
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.658
ADP18591.1
Ankyrin repeat family protein 2.
  
 0.609
rplI
Ribosomal protein L9; Binds to the 23S rRNA.
 
 
 
 0.565
ADP19035.1
Ankyrin repeat family protein 3.
  
 0.554
ADP16160.1
Ankyrin repeat family protein 1.
  
 0.546
rseP
RIP metalloprotease RseP.
 
  
 0.536
rpsP
Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
 
 
 0.522
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
  
 0.520
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.