STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13565.1Outer membrane protein W. (212 aa)    
Predicted Functional Partners:
hemN1
Oxygen-independent coproporphyrinogen III oxidase 1; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.857
ccoO
Cytochrome c oxidase, cbb3-type, subunit II.
 
  
 0.811
ccoN
Cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.755
ccoG
Cytochrome c oxidase accessory protein CcoG.
 
  
 0.736
ccoP
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
  
 0.608
hemN2
Oxygen-independent coproporphyrinogen III oxidase 2; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
  
 0.536
ADP17610.1
Polyphosphate kinase 2 family protein 1.
   
    0.522
ADP17640.1
Polyphosphate kinase 2 domain protein.
   
    0.522
ADP19495.1
Polyphosphate kinase 2 family protein 2.
   
    0.522
ADP18194.1
Hypothetical protein.
   
    0.520
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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