STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
capLProtein CapL; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (425 aa)    
Predicted Functional Partners:
ADP18914.1
VI polysaccharide biosynthesis protein VipB/TviC.
 
 
 0.977
ADP15028.1
UDP-N-acetylglucosamine 2-epimerase 1; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.975
ADP19579.1
Oxidoreductase family, NAD-binding Rossmann fold family protein.
 
 
 0.951
glmU
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
  
 
 0.930
capD
Polysaccharide biosynthesis protein CapD.
  
 
 0.930
vipA
Vi polysaccharide biosynthesis protein VipA/TviB; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 
0.904
ADP13597.1
Glycosyl transferase, group 1 family protein 2.
 
  
 0.847
ADP18908.1
Glycosyl transferase, group 1 family protein 10.
 
  
 0.776
ADP19581.1
Pleiotropic regulatory protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.768
ADP19589.1
UDP-N-acetylglucosamine 2-epimerase 2; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.768
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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