STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13603.1Pectate lyase family protein. (402 aa)    
Predicted Functional Partners:
ADP13601.1
Capsule polysaccharide export inner-membrane protein.
       0.758
ADP13600.1
ATPase component of an ABC polysaccharide exporter.
       0.754
ADP13602.1
Tetratricopeptide repeat family protein 2.
       0.754
ADP13598.1
Polysaccharide biosynthesis/export family protein.
       0.744
ADP13599.1
ABC-2 type transporter family protein 2.
       0.744
ADP13597.1
Glycosyl transferase, group 1 family protein 2.
  
  
 0.626
ADP13596.1
Tetratricopeptide repeat family protein 1.
       0.623
capL
Protein CapL; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
       0.524
ADP17343.1
Hypothetical protein.
     
 0.446
ADP18828.1
Alpha/beta hydrolase fold family protein 16.
  
    0.404
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.