STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13606.1OsmC family protein 1. (135 aa)    
Predicted Functional Partners:
ADP18788.1
Transcriptional regulator OhrR 1.
 
  
 0.647
ADP19480.1
Transcriptional regulator OhrR 2.
 
  
 0.615
katE
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.598
ADP16221.1
Ferritin-like domain protein 1; Belongs to the Dps family.
  
  
 0.475
ADP16647.1
Ferritin-like domain protein 2; Belongs to the Dps family.
  
  
 0.475
ADP13607.1
Cyclic nucleotide-binding domain protein 1.
     
 0.446
ADP18747.1
LytTr DNA-binding domain protein.
   
    0.440
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.