Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13626.1Sensory box protein 2. (942 aa)    
Predicted Functional Partners:
ADP19334.1
Sensory box protein 11.
  
 
 0.963
ADP16587.1
Sensory box protein 6.
  
 
 0.940
ADP16593.1
EAL domain protein 3.
  
 
 0.901
ADP14390.1
Response regulator 2.
  
 
 0.885
cheA2
CheA signal transduction histidine kinase 2.
  
 
 0.878
ADP16992.1
Response regulator receiver modulated diguanylate cyclase.
  
 
 0.871
ADP13787.1
His Kinase A phosphoacceptor domain protein 1.
  
 
 0.865
ADP13941.1
c-di-GMP phosphodiesterase A.
  
 
 0.865
ADP14389.1
His Kinase A phosphoacceptor domain protein 3.
  
 
 0.865
ADP14391.1
His Kinase A phosphoacceptor domain protein 4.
  
 
 0.865
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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