STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dcaS1N-carbamoyl-D-amino-acid hydrolase 1. (331 aa)    
Predicted Functional Partners:
ADP13458.1
Agmatine deiminase; Belongs to the agmatine deiminase family.
  
 0.722
ADP13648.1
Amidohydrolase-like protein.
  
     0.597
hyuE
Hydantoin racemase.
 
   
 0.566
ADP13630.1
Ornithine cyclodeaminase/mu-crystallin family protein 1.
     
 0.543
ADP13632.1
Bacterial regulatory helix-turn-helix protein, AsnC family protein 3.
       0.458
ADP16866.1
Polysaccharide deacetylase family protein 9.
 
    0.439
dpaL
Diaminopropionate ammonia-lyase.
 
   0.422
dgdA
2,2-dialkylglycine decarboxylase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.418
ADP13627.1
Hypothetical protein.
 
 0.406
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
Server load: low (20%) [HD]