Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADP13660.1Bacterial regulatory protein, GntR family protein 3. (239 aa)    
Predicted Functional Partners:
ADP13387.1
Bacterial regulatory protein, GntR family protein 2.
  
     0.769
ADP15930.1
Bacterial regulatory protein, GntR family protein 27.
  
  
 0.762
ADP19286.1
Bacterial regulatory protein, GntR family protein 68.
  
  
 0.745
ADP15806.1
Bacterial regulatory protein, GntR family protein 23.
  
     0.732
ADP15845.1
Bacterial regulatory protein, GntR family protein 25.
  
     0.713
ADP16889.1
Bacterial regulatory protein, GntR family protein 38.
  
     0.712
ADP14759.1
Bacterial regulatory protein, GntR family protein 14.
  
     0.704
ADP13661.1
Hypothetical protein.
 
    0.640
ADP17832.1
Bacterial regulatory protein, GntR family protein 50.
  
  
 0.620
ADP17749.1
Bacterial regulatory protein, GntR family protein 48.
  
  
 0.610
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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