Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13671.1Integral membrane protein 1. (475 aa)    
Predicted Functional Partners:
ADP13672.1
Hypothetical protein.
 
  
 0.962
ADP14545.1
DNA translocase FtsK.
  
 
 0.709
ADP17002.1
VRR-NUC domain protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
  
 
 0.643
ADP18416.1
Hypothetical protein.
 
 
 
 0.620
ADP17142.1
Hypothetical protein.
  
     0.590
ADP13673.1
Hypothetical protein.
   
 
 0.547
ADP17637.1
Membrane protein 6.
  
     0.534
ADP15489.1
Hypothetical protein.
  
     0.529
ADP13670.1
Molybdenum-pterin-binding protein 3.
       0.512
ssuE
FMN reductase.
 
   
 0.486
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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