STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fdnGFormate dehydrogenase-N, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (821 aa)    
Predicted Functional Partners:
ADP13678.1
Formate dehydrogenase-O, major subunit domain protein.
  
  0.999
fdxH
Formate dehydrogenase, beta subunit.
 
 0.999
ADP13681.1
Formate dehydrogenase, gamma subunit.
 
 0.998
fdhE
Formate dehydrogenase accessory protein FdhE; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.
 
 
 0.940
ADP18489.1
NAD-dependent formate dehydrogenase gamma subunit.
  
 0.935
ADP18490.1
NAD-dependent formate dehydrogenase beta subunit.
  
 0.933
selA
L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
 
  
 0.920
fdhF
Formate dehydrogenase H.
 
 
0.918
selB
Selenocysteine-specific translation elongation factor.
 
   
 0.914
fghA
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
  
 
  0.905
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.