STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gph1Phosphoglycolate phosphatase, bacterial 1; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. (235 aa)    
Predicted Functional Partners:
ADP19403.1
HAD-superfamily hydrolase, subfamily IA, variant 1 family protein 2.
  
  
  0.920
ADP14874.1
IndB protein.
  
  
0.919
rpe
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 0.918
glcE
Glycolate oxidase subunit GlcE.
 
  
 0.918
ADP14110.1
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein 2.
    
 0.907
ADP14619.1
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein 3.
    
 0.907
glcD
Glycolate oxidase subunit GlcD.
    
 0.907
ADP15246.1
Glycolate oxidase iron-sulfur subunit.
    
 0.907
ADP18022.1
Cysteine-rich domain protein.
    
 0.907
apaG
Hypothetical protein.
  
    0.671
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.