Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pcaD13-oxoadipate enol-lactonase 1. (265 aa)    
Predicted Functional Partners:
ADP19293.1
4-carboxymuconolactone decarboxylase.
 
 0.993
catC
Muconolactone delta-isomerase.
 
 
 0.952
ADP17005.1
Carboxymuconolactone decarboxylase family protein 3.
 
 
 0.918
pcaD2
3-oxoadipate enol-lactonase 2.
  
  
 
0.907
ADP15300.1
Carboxymuconolactone decarboxylase family protein 2.
   
 
 0.903
tftE1
Maleylacetate reductase 1.
     
 0.903
ADP15518.1
3-oxoadipate CoA-transferase subunit B 1.
  
 
 0.685
ADP17977.1
3-oxoadipate CoA-transferase subunit B 2.
  
 
 0.685
ADP18363.1
3-oxoadipate CoA-transferase subunit B 3.
  
 
 0.685
ADP18708.1
3-oxoadipate CoA-transferase subunit B 4.
  
 
 0.685
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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