STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13711.1Bacterial regulatory helix-turn-helix protein, LysR family protein 10; Belongs to the LysR transcriptional regulatory family. (307 aa)    
Predicted Functional Partners:
pcaD1
3-oxoadipate enol-lactonase 1.
 
     0.637
ADP15023.1
Tat pathway signal sequence domain protein 8.
  
     0.559
ADP13403.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 1.
  
    0.493
ADP15026.1
Bacteriophage N4 adsorption protein B.
  
   
 0.492
ADP13689.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 9; Belongs to the LysR transcriptional regulatory family.
  
     0.486
ADP18145.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 159; Belongs to the LysR transcriptional regulatory family.
  
     0.484
ADP16852.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 110; Belongs to the LysR transcriptional regulatory family.
  
     0.466
ADP15973.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 80; Belongs to the LysR transcriptional regulatory family.
  
     0.464
ADP14714.1
Bacterial regulatory protein, LuxR family protein 5.
  
   
 0.430
ADP15876.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 71; Belongs to the LysR transcriptional regulatory family.
  
     0.408
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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