STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
urtB1Urea ABC transporter, permease protein UrtB 1; Belongs to the binding-protein-dependent transport system permease family. (314 aa)    
Predicted Functional Partners:
urtC1
Urea ABC transporter, permease protein UrtC 1; Belongs to the binding-protein-dependent transport system permease family.
 
 0.993
urtD1
Urea ABC transporter, ATP-binding protein UrtD 1.
 
 
 0.990
urtE1
Urea ABC transporter, ATP-binding protein UrtE 1.
 
 
 0.989
urtA
ABC transporter, substrate-binding UrtA.
 
 
 0.988
urtC2
Urea ABC transporter, permease protein UrtC 2; Belongs to the binding-protein-dependent transport system permease family.
 
 0.974
ADP18534.1
Branched-chain amino acid transport system substrate-binding protein.
 
 
 0.966
ADP16022.1
Receptor family ligand binding region family protein 15.
 
 
 0.965
urtE2
Urea ABC transporter, ATP-binding protein UrtE 2.
 
 
 0.962
urtD2
Urea ABC transporter, ATP-binding protein UrtD 2.
 
 
 0.958
ADP16025.1
ABC transporter family protein 41.
 
 
 0.923
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.