STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13745.1Autotransporter beta-domain protein. (319 aa)    
Predicted Functional Partners:
ADP17124.1
Outer membrane autotransporter barrel domain protein 6.
  
 0.796
ADP16978.1
Outer membrane autotransporter barrel domain protein 5.
  
 0.722
ADP13746.1
Peptidase family M20/M25/M40 family protein 1.
       0.666
dapD1
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 1; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.
       0.570
ADP13748.1
Oligopeptide transport ATP-binding protein AppF 1; Belongs to the ABC transporter superfamily.
       0.566
ADP13749.1
Oligopeptide/dipeptide abc transporter, ATP-binding protein, c-terminal domain protein 1; Belongs to the ABC transporter superfamily.
       0.566
ADP13747.1
Hypothetical protein.
       0.553
ADP18368.1
Disulfide bond formation protein B.
  
     0.540
ADP14609.1
YadA-like C-terminal domain protein 1.
  
   
 0.530
ADP18071.1
Outer membrane autotransporter barrel domain protein 7.
  
  
 0.521
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.