STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13748.1Oligopeptide transport ATP-binding protein AppF 1; Belongs to the ABC transporter superfamily. (336 aa)    
Predicted Functional Partners:
dppC2
Dipeptide transport system permease protein DppC 2.
 
 0.906
ADP13751.1
Binding-protein-dependent transport system inner membrane component family protein 6.
 
 
 0.839
ADP17075.1
Binding-protein-dependent transport system inner membrane component family protein 46.
 
 0.831
ADP19805.1
Binding-protein-dependent transport system inner membrane component family protein 68.
 
 
 0.817
ADP13749.1
Oligopeptide/dipeptide abc transporter, ATP-binding protein, c-terminal domain protein 1; Belongs to the ABC transporter superfamily.
 
    
0.811
ADP13747.1
Hypothetical protein.
       0.773
dppC4
Dipeptide transport system permease protein DppC 4.
 
 0.771
gsiD2
Glutathione transport system permease protein GsiD 2.
 
 0.769
ADP14647.1
Binding-protein-dependent transport system inner membrane component family protein 14.
 
 0.763
ADP14926.1
Binding-protein-dependent transport system inner membrane component family protein 25.
 
 0.762
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.