STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13761.1Bacterial regulatory protein, TetR family protein 2. (207 aa)    
Predicted Functional Partners:
ADP13762.1
acyl-CoA dehydrogenase, N-terminal domain protein 2.
       0.632
ADP13759.1
enoyl-CoA hydratase/isomerase family protein 2.
  
    0.496
ADP13760.1
2-nitropropane dioxygenase family protein 2.
       0.495
ADP15101.1
Phenylacetic acid degradation protein PaaC.
  
     0.416
paaJ
phenylacetate-CoA oxygenase, PaaJ subunit.
 
     0.412
paaA
phenylacetate-CoA oxygenase, PaaA subunit.
  
     0.405
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.