STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13768.1Bacterial transcriptional regulator family protein 2. (257 aa)    
Predicted Functional Partners:
uca
Urea carboxylase.
  
    0.714
ADP18865.1
Bacterial transcriptional regulator family protein 32.
  
     0.639
ADP19709.1
Bacterial transcriptional regulator family protein 38.
  
     0.609
ADP17874.1
Bacterial regulatory protein, ArsR family protein 5.
  
     0.576
ADP16605.1
Bacterial transcriptional regulator family protein 19.
  
     0.548
ADP18447.1
Bacterial transcriptional regulator family protein 30.
  
     0.527
ADP14570.1
Bacterial transcriptional regulator family protein 7.
  
     0.497
ADP18210.1
Bacterial transcriptional regulator family protein 26.
  
     0.496
ADP17733.1
IclR helix-turn-helix domain protein 2.
  
     0.487
ADP13767.1
CobW/HypB/UreG, nucleotide-binding domain protein 1.
       0.485
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.