STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13771.1Short chain dehydrogenase family protein 4. (273 aa)    
Predicted Functional Partners:
ADP13770.1
Short chain dehydrogenase family protein 3.
 
    
0.759
ADP13772.1
Carboxymuconolactone decarboxylase family protein 1.
 
     0.752
ADP19308.1
Short chain dehydrogenase family protein 63.
  
     0.728
ADP13773.1
Extra-cytoplasmic solute receptor family protein 7.
       0.582
ADP13769.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 12; Belongs to the LysR transcriptional regulatory family.
       0.535
acpP2
Acyl carrier protein 2; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.400
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.