STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13778.1Bacterial regulatory protein, GntR family protein 4. (251 aa)    
Predicted Functional Partners:
ADP13780.1
Carbohydrate kinase, FGGY family protein 1; Belongs to the FGGY kinase family.
 
   
 0.869
glpD1
Glycerol-3-phosphate dehydrogenase 1.
       0.778
phnJ
Phosphonate metabolism PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
  
 0.775
ADP18269.1
Bacterial regulatory protein, GntR family protein 54.
  
   
 0.760
phnD
Phosphonate ABC transporter, periplasmic phosphonate binding protein.
  
  
 0.738
phnI
Phosphonate metabolism PhnI.
 
  
 0.643
ADP17832.1
Bacterial regulatory protein, GntR family protein 50.
  
  
 0.619
phnG
Phosphonate C-P lyase system protein PhnG.
  
  
 0.618
ADP13781.1
Tat pathway signal sequence domain protein 2.
 
  
 0.601
ADP13783.1
Inner-membrane translocator 3; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.593
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.