ku protein (Achromobacter xylosoxidans) - STRING interaction network

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ku

Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. (307 aa)

Predicted Functional Partners:

ligD1

0.997

ADP16574.1

0.774

ADP15716.1

0.632

ADP16578.1

0.601

ADP13794.1

0.571

recF

0.541

ADP13798.1

0.538

treY

0.483

ADP13793.1

0.482

ADP16270.1

0.463

Your Current Organism:

Achromobacter xylosoxidans

NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADP13793.1	ADP13794.1	AXYL_00435	AXYL_00436	Prolyl oligopeptidase family protein 1.	Hypothetical protein.	0.766
ADP13793.1	ku	AXYL_00435	AXYL_00437	Prolyl oligopeptidase family protein 1.	Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.482
ADP13793.1	ligD1	AXYL_00435	AXYL_00438	Prolyl oligopeptidase family protein 1.	DNA ligase D 1.	0.525
ADP13794.1	ADP13793.1	AXYL_00436	AXYL_00435	Hypothetical protein.	Prolyl oligopeptidase family protein 1.	0.766
ADP13794.1	ku	AXYL_00436	AXYL_00437	Hypothetical protein.	Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.571
ADP13794.1	ligD1	AXYL_00436	AXYL_00438	Hypothetical protein.	DNA ligase D 1.	0.666
ADP13798.1	ku	AXYL_00440	AXYL_00437	NAD dependent epimerase/dehydratase family protein 2.	Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.538
ADP13798.1	ligD1	AXYL_00440	AXYL_00438	NAD dependent epimerase/dehydratase family protein 2.	DNA ligase D 1.	0.556
ADP15716.1	ADP16574.1	AXYL_02395	AXYL_03254	Hypothetical protein.	DNA topoisomerase.	0.524
ADP15716.1	ku	AXYL_02395	AXYL_00437	Hypothetical protein.	Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.632
ADP15716.1	ligD1	AXYL_02395	AXYL_00438	Hypothetical protein.	DNA ligase D 1.	0.844
ADP16270.1	ku	AXYL_02950	AXYL_00437	Hypothetical protein.	Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.463
ADP16270.1	ligD1	AXYL_02950	AXYL_00438	Hypothetical protein.	DNA ligase D 1.	0.647
ADP16574.1	ADP15716.1	AXYL_03254	AXYL_02395	DNA topoisomerase.	Hypothetical protein.	0.524
ADP16574.1	ADP16578.1	AXYL_03254	AXYL_03258	DNA topoisomerase.	Short chain dehydrogenase family protein 32.	0.689
ADP16574.1	ku	AXYL_03254	AXYL_00437	DNA topoisomerase.	Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.774
ADP16574.1	ligD1	AXYL_03254	AXYL_00438	DNA topoisomerase.	DNA ligase D 1.	0.891
ADP16574.1	treY	AXYL_03254	AXYL_03246	DNA topoisomerase.	Malto-oligosyltrehalose synthase.	0.633
ADP16578.1	ADP16574.1	AXYL_03258	AXYL_03254	Short chain dehydrogenase family protein 32.	DNA topoisomerase.	0.689
ADP16578.1	ku	AXYL_03258	AXYL_00437	Short chain dehydrogenase family protein 32.	Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.601

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