STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
ADP13831.1D-galactarate dehydratase/altronate hydrolase family protein 1. (391 aa)    
Predicted Functional Partners:
ADP13832.1
D-galactarate dehydratase/altronate hydrolase family protein 2.
 
  
  0.992
ADP13828.1
malate/L-lactate dehydrogenase family protein 1; Belongs to the LDH2/MDH2 oxidoreductase family.
 
  
 0.963
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
     
  0.900
garL1
2-dehydro-3-deoxyglucarate aldolase 1; Belongs to the HpcH/HpaI aldolase family.
  
 
 0.623
ADP13833.1
Bacterial regulatory protein, GntR family protein 6.
 
   
 0.599
serA1
D-3-phosphoglycerate dehydrogenase 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
 
 0.590
kdgD
5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.
    
 0.581
ADP18845.1
D-mannonate oxidoreductase.
 
  
 0.480
ADP13830.1
Extra-cytoplasmic solute receptor family protein 10.
       0.468
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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