Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ADP13833.1Bacterial regulatory protein, GntR family protein 6. (251 aa)    
Predicted Functional Partners:
ADP18269.1
Bacterial regulatory protein, GntR family protein 54.
  
     0.708
ADP13832.1
D-galactarate dehydratase/altronate hydrolase family protein 2.
 
   
 0.639
ADP17832.1
Bacterial regulatory protein, GntR family protein 50.
  
  
 0.619
ADP13831.1
D-galactarate dehydratase/altronate hydrolase family protein 1.
 
   
 0.599
ADP19219.1
Bacterial regulatory protein, GntR family protein 67.
  
  
 0.542
ADP14351.1
MerR family regulatory family protein 2.
 
  
 0.525
ADP15579.1
Bacterial regulatory protein, GntR family protein 20.
  
  
 0.495
metX1
Homoserine O-acetyltransferase 1; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine.
       0.481
metW
Methionine biosynthesis protein MetW.
       0.481
ADP18854.1
Bacterial regulatory protein, GntR family protein 60.
  
  
 0.469
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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