STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13847.1FecR family protein 3. (337 aa)    
Predicted Functional Partners:
ADP13848.1
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.962
ADP13777.1
RNA polymerase sigma factor, sigma-70 family protein 2; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.837
ADP15862.1
RNA polymerase sigma factor FecI 5; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.837
ADP18063.1
RNA polymerase, sigma-24 subunit, ECF subfamily 2; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.837
ADP18229.1
RNA polymerase sigma factor FecI 12; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.837
ADP14695.1
RNA polymerase, sigma-24 subunit, ECF subfamily 1; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.836
ADP15865.1
RNA polymerase sigma factor FecI 6; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.836
ADP17047.1
RNA polymerase sigma factor FecI 8; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.836
ADP17162.1
RNA polymerase sigma factor FecI 9; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.836
ADP18060.1
RNA polymerase sigma factor FecI 10; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.836
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.