STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phoRPhosphate regulon sensor kinase PhoR. (435 aa)    
Predicted Functional Partners:
phoB
Phosphate regulon transcriptional regulatory protein PhoB.
 
 0.998
irlR1
Transcriptional activator protein IrlR 1.
 
 
 0.856
ompR1
Transcriptional regulatory protein OmpR 1.
 
 
 0.853
ADP16644.1
Response regulator 10.
 
 
 0.826
qseB4
Transcriptional regulatory protein QseB 4.
 
 
 0.826
ompR2
Transcriptional regulatory protein OmpR 2.
 
 
 0.825
ADP16230.1
Transcriptional regulatory protein ResD.
 
 
 0.814
ADP17251.1
Transcriptional regulatory protein CpxR.
 
 
 0.813
ADP15293.1
Response regulator 3.
 
 
 0.809
ADP19757.1
Response regulator 23.
 
 
 0.806
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.