STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13869.1AMP-binding enzyme family protein 1. (505 aa)    
Predicted Functional Partners:
ADP13868.1
Citrate synthase 2.
 
   
 0.806
ADP13870.1
Extra-cytoplasmic solute receptor family protein 11.
       0.768
ADP13871.1
Bacterial transcriptional regulator family protein 3.
   
   0.566
dltA
D-alanyl-poly(phosphoribitol) synthetase.
 
  
0.431
ADP14954.1
AMP-binding enzyme family protein 5.
 
0.424
thcB
Cytochrome P450.
  
 0.423
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
 0.421
ADP18341.1
Benzoate-coenzyme A ligase.
 
0.420
ADP15730.1
AMP-binding enzyme family protein 9.
 
0.410
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.