STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13878.1Glutathione S-transferase, N-terminal domain protein 1. (199 aa)    
Predicted Functional Partners:
ADP13880.1
Short chain dehydrogenase family protein 6.
   
   0.732
ADP13881.1
Short chain dehydrogenase family protein 7.
   
   0.732
ADP13879.1
FAD binding domain protein 1.
  
  
 0.708
braF1
High-affinity branched-chain amino acid transport ATP-binding protein BRAF 1.
       0.663
ADP13884.1
Inner-membrane translocator 6; Belongs to the binding-protein-dependent transport system permease family.
       0.663
ADP13885.1
Inner-membrane translocator 7; Belongs to the binding-protein-dependent transport system permease family.
       0.663
ADP13882.1
ABC transporter family protein 8.
       0.652
lysS
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 0.544
ADP13886.1
Receptor family ligand binding region family protein 3.
       0.507
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.487
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.