STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13939.1Hypothetical protein. (125 aa)    
Predicted Functional Partners:
ADP13938.1
Hypothetical protein.
 
   0.993
ADP13937.1
HAMP domain protein 1.
 
    0.954
ADP13940.1
Diguanylate cyclase, GGDEF domain protein 1.
  
   0.863
ADP13941.1
c-di-GMP phosphodiesterase A.
       0.659
ADP14171.1
Diguanylate cyclase, GGDEF domain protein 2.
  
   0.586
ADP15656.1
Diguanylate cyclase, GGDEF domain protein 11.
  
   0.586
ADP16146.1
Diguanylate cyclase, GGDEF domain protein 12.
  
   0.586
ADP17134.1
Diguanylate cyclase, GGDEF domain protein 14.
  
   0.586
ADP18822.1
Diguanylate cyclase, GGDEF domain protein 16.
  
   0.586
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.