STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13954.1Isochorismatase family protein 3. (203 aa)    
Predicted Functional Partners:
ADP13955.1
Short chain dehydrogenase family protein 12.
   
  0.878
ADP13952.1
Rieske [2Fe-2S] domain protein 1.
 
     0.838
ADP13953.1
Ring hydroxylating beta subunit family protein 1.
 
     0.829
dlhH1
Carboxymethylenebutenolidase 1.
  
  
 0.774
ADP14006.1
Isochorismatase family protein 4.
  
     0.756
ADP19258.1
Isochorismatase family protein 14.
  
     0.743
ADP19303.1
Isochorismatase family protein 15.
  
     0.694
ADP17556.1
Isochorismatase family protein 11.
  
     0.690
ADP13950.1
Receptor family ligand binding region family protein 6.
       0.679
ADP17620.1
NAD-dependent glycerol-3-phosphate dehydrogenase family protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
 
   0.464
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.