STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP13955.1Short chain dehydrogenase family protein 12. (268 aa)    
Predicted Functional Partners:
ADP13954.1
Isochorismatase family protein 3.
   
  0.878
ADP13953.1
Ring hydroxylating beta subunit family protein 1.
 
  
 0.802
ADP13952.1
Rieske [2Fe-2S] domain protein 1.
 
   
 0.791
dlhH1
Carboxymethylenebutenolidase 1.
  
   0.759
ADP13950.1
Receptor family ligand binding region family protein 6.
   
   0.670
ADP14322.1
Isochorismatase family protein 6.
    
  0.528
ADP19258.1
Isochorismatase family protein 14.
    
  0.528
ADP17260.1
Short chain dehydrogenase family protein 40.
 
 
 
 0.501
ADP13949.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 5.
 
     0.467
acpP2
Acyl carrier protein 2; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.400
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.