STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP14031.1Bacterial regulatory helix-turn-helix protein, AraC family protein 6. (321 aa)    
Predicted Functional Partners:
ADP14032.1
Isochorismatase family protein 5.
 
    0.922
ADP19101.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 37.
  
     0.763
ADP15689.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 12.
 
 
 0.584
ADP16933.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 20.
 
 
 0.565
ADP19733.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 40.
 
 
 0.501
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
       0.498
ADP16919.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 19.
 
 
 0.476
ADP17553.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 24.
 
 
 0.457
ADP16861.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 17.
 
 
 0.433
ADP18601.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 32.
 
 
 0.420
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.