Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP14085.1LysE type translocator family protein 4. (214 aa)    
Predicted Functional Partners:
ADP14086.1
Hypothetical protein.
     
 0.789
ADP14087.1
Bacterial regulatory protein, GntR family protein 11.
     
 0.569
ADP14088.1
Hypothetical protein.
 
     0.519
ADP15843.1
LysE type translocator family protein 8.
 
   
 0.490
ADP18716.1
LysE type translocator family protein 14.
  
     0.482
ADP19379.1
LysE type translocator family protein 16.
  
     0.448
ADP16223.1
LysE type translocator family protein 10.
  
     0.447
ADP16924.1
LysE type translocator family protein 11.
 
   
 0.432
ADP13483.1
LysE type translocator family protein 1.
 
   
 0.426
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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