Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ADP14111.1Bacterial regulatory helix-turn-helix protein, LysR family protein 25; Belongs to the LysR transcriptional regulatory family. (311 aa)    
Predicted Functional Partners:
ADP15691.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 61; Belongs to the LysR transcriptional regulatory family.
  
     0.564
ADP15633.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 59; Belongs to the LysR transcriptional regulatory family.
  
     0.560
acpD
Fmn-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.
       0.534
ADP18088.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 156; Belongs to the LysR transcriptional regulatory family.
  
     0.447
ADP19110.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 189; Belongs to the LysR transcriptional regulatory family.
  
     0.429
ADP18329.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 164; Belongs to the LysR transcriptional regulatory family.
  
     0.426
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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