STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP14113.1NAD binding domain of 6-phosphogluconate dehydrogenase family protein 1. (301 aa)    
Predicted Functional Partners:
mmsA1
Methylmalonate-semialdehyde dehydrogenase (acylating) 1.
 
 
 0.928
mmsA2
Methylmalonate-semialdehyde dehydrogenase (acylating) 2.
 
 
 0.928
mmsA3
Methylmalonate-semialdehyde dehydrogenase (acylating) 3.
 
 
 0.927
ADP15931.1
Aldehyde dehydrogenase family protein 1; Belongs to the aldehyde dehydrogenase family.
  
 
 0.913
ADP19390.1
Aldehyde dehydrogenase family protein 5; Belongs to the aldehyde dehydrogenase family.
  
 
 0.913
ADP14921.1
Omega-amino acid:pyruvate transaminase 1; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
  0.900
gabT1
4-aminobutyrate transaminase 1; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.900
ADP18923.1
Omega-amino acid:pyruvate transaminase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
  0.900
acdC2
acyl-CoA dehydrogenase 2.
  
 
 0.824
prpC
2-methylcitrate synthase; Belongs to the citrate synthase family.
  
 
 0.818
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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