Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADP14171.1Diguanylate cyclase, GGDEF domain protein 2. (578 aa)    
Predicted Functional Partners:
ADP14390.1
Response regulator 2.
 
  
 0.858
ADP16593.1
EAL domain protein 3.
 
  
 0.848
ADP19316.1
EAL domain protein 7.
 
  
 0.843
ADP16425.1
Response regulator 8.
 
  
 0.841
ADP15544.1
Diguanylate cyclase, GGDEF domain protein 8.
 
  
 0.837
ADP16568.1
EAL domain protein 2.
 
  
 0.837
ADP18957.1
EAL domain protein 6.
 
  
 0.837
ADP18637.1
EAL domain protein 5.
 
  
 0.835
ADP16670.1
EAL domain protein 4.
 
  
 0.807
ADP16808.1
HD domain protein 1.
 
  
 0.803
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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